STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_01073cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases. (188 aa)    
Predicted Functional Partners:
FIC_01074
Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  0.903
FIC_01069
cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.
 
     0.829
FIC_01204
Putative transcriptional regulator, AraC family.
  
    0.727
FIC_01742
TonB-dependent receptor, plug.
  
     0.702
FIC_01741
RagB/SusD domain protein.
  
     0.682
FIC_01712
Signal transduction histidine kinase.
  
 
 0.623
FIC_01079
Transcriptional regulator.
  
    0.600
FIC_00774
PAS/PAC domain protein.
  
 
 0.591
FIC_01779
PAS/PAC domain protein.
  
 
 0.572
FIC_02317
RagB/SusD domain protein.
  
     0.553
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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