STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_01115Neopullulanase; Belongs to the glycosyl hydrolase 13 family. (618 aa)    
Predicted Functional Partners:
FIC_01114
Hypothetical protein.
     0.898
FIC_00677
Alpha amylase, catalytic region; Belongs to the glycosyl hydrolase 13 family.
 
  
 0.810
FIC_00548
Hypothetical transport protein.
 
    0.778
FIC_00542
SusD, outer membrane protein.
 
    0.772
FIC_00541
SusC, outer membrane protein involved in starch binding.
  
    0.756
FIC_00543
Hypothetical protein.
 
  
 0.739
FIC_00545
Alpha-glucosidase.
 
  
 0.597
FIC_01752
Putative alpha-dextrin endo-1, 6-alpha-glucosidase.
     0.577
FIC_00604
Amino acid permease.
   
 0.553
FIC_00996
Amino acid permease-associated region.
   
 0.553
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.