STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_01181Hypothetical protein. (293 aa)    
Predicted Functional Partners:
rlmN
Radical SAM enzyme, Cfr family protein; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.
       0.785
FIC_01180
Protein of unknown function DUF1275.
       0.773
FIC_02244
Putative TonB-dependent receptor.
  
 
   0.606
FIC_01182
Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family.
       0.567
FIC_00264
ATP-dependent helicase; Belongs to the helicase family. UvrD subfamily.
  
    0.556
FIC_02312
Hypothetical protein.
  
 
   0.514
FIC_02297
Hypothetical protein.
  
     0.499
FIC_01638
Putative hemin receptor.
  
     0.490
FIC_02246
Hypothetical protein.
  
     0.489
FIC_00121
Hypothetical protein.
  
    0.474
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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