STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_01187Hypothetical protein. (186 aa)    
Predicted Functional Partners:
FIC_01188
Cytosolic long-chain acyl-CoA thioester hydrolase family protein.
       0.773
FIC_01189
UPF0246 protein YaaA; Belongs to the UPF0246 family.
       0.727
FIC_01186
Lead, cadmium, zinc and mercury transporting ATPase.
 
     0.690
FIC_01190
S23 ribosomal protein.
       0.510
FIC_00252
Hypothetical protein; Belongs to the UPF0312 family.
  
     0.417
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.