STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_01253UspA. (303 aa)    
Predicted Functional Partners:
FIC_00691
Universal stress protein family.
  
     0.744
FIC_01254
Hypothetical protein.
  
    0.740
FIC_01255
Amino acid racemase.
       0.737
FIC_00774
PAS/PAC domain protein.
 
  
 0.571
FIC_01256
Transcriptional regulator, AraC family.
       0.560
FIC_01252
Hypothetical protein.
       0.492
FIC_01712
Signal transduction histidine kinase.
  
  
 0.487
FIC_02081
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.480
FIC_01278
WD40-like beta Propeller.
 
  
 0.459
FIC_01779
PAS/PAC domain protein.
  
  
 0.453
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.