STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_01311Curli production assembly/transport component CsgG. (456 aa)    
Predicted Functional Partners:
FIC_01312
Curli production assembly/transport component CsgF.
 
 
 0.992
FIC_01310
Fibronectin, type III domain protein.
 
    0.954
FIC_01314
Hypothetical protein.
 
  
 0.827
FIC_01313
Hypothetical protein.
       0.691
FIC_01239
Helix-turn-helix- domain containing protein, AraC type.
  
     0.492
FIC_00667
Helix-turn-helix domain protein.
  
    0.479
FIC_00605
Glycosyl hydrolase, BNR repeat-containing protein.
  
     0.455
FIC_00262
Hypothetical protein.
  
     0.429
FIC_02301
Hypothetical protein.
  
     0.408
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.