STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_01397Polysaccharide deacetylase family protein. (323 aa)    
Predicted Functional Partners:
FIC_01398
Hypothetical protein.
     
 0.800
FIC_01399
DNA repair protein RadC; Belongs to the UPF0758 family.
       0.784
FIC_01396
Glycosyl transferase, group 2 family protein.
       0.782
FIC_01394
Inorganic pyrophosphatase.
       0.701
FIC_01395
Hypothetical protein.
       0.701
lolD
Lipoprotein releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
       0.615
FIC_01710
Hyaluronan synthase.
 
  
 0.597
FIC_01775
Phosphoglycerol transferase.
  
  
 0.563
FIC_01776
Glycosyl transferase, family 2.
  
  
 0.563
FIC_00726
Glycosyltransferase.
  
  
 0.521
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.