STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_01466Isoaspartyl aminopeptidase / Asp-X dipeptidase. (337 aa)    
Predicted Functional Partners:
FIC_01367
Asparaginase.
  
  
 
0.921
FIC_00495
L-asparaginase.
     
 0.908
FIC_01692
Asparagine synthetase (glutamine-hydrolyzing).
     
 0.908
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
    
  0.905
FIC_01345
Aspartate aminotransferase.
    
  0.904
FIC_01433
Aminotransferase, class I.
    
  0.904
FIC_02175
Aspartate aminotransferase.
    
  0.904
FIC_00580
Aspartate ammonia-lyase.
     
  0.900
FIC_00810
Aspartate ammonia-lyase.
     
  0.900
FIC_00878
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
     
  0.900
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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