STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_01508Beta-carotene hydroxylase. (170 aa)    
Predicted Functional Partners:
FIC_01506
Phytoene synthase.
 
 
 0.988
FIC_01505
Phytoene dehydrogenase.
 
   
 0.968
FIC_01509
Lycopene cyclase.
 
   
 0.939
FIC_01510
Cell division inhibitor.
 
     0.847
FIC_01507
Hypothetical protein.
 
     0.830
FIC_01511
Putative nucleoside-diphosphate-sugar epimerase.
     
 0.778
FIC_01729
2-polyprenyl-6-methoxyphenol hydroxylase-likeFAD-dependent oxidoreductases.
   
 
 0.646
FIC_01504
Possible transcriptional regulator, MarR family.
 
    0.607
FIC_00523
Putative Nudix hydrolase YfcD.
  
  
 0.534
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.