STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_01515Peptidase M4, thermolysin. (544 aa)    
Predicted Functional Partners:
FIC_01152
Hypothetical protein.
 
     0.844
FIC_00476
Immunoreactive 84 kDa antigen PG93.
  
     0.750
FIC_00568
Hypothetical protein.
  
     0.750
FIC_01285
Low affinity penicillin binding protein.
  
     0.749
FIC_01304
TonB-dependent receptor, plug.
  
     0.744
FIC_01949
CHU large protein; uncharacterized.
  
     0.729
FIC_02045
Hypothetical protein.
  
     0.726
FIC_00862
Endonuclease I.
 
     0.700
FIC_00596
Subtilisin-like serine protease; Belongs to the peptidase S8 family.
  
 
 0.681
FIC_00567
Hypothetical protein.
  
     0.679
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.