STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_01617Periplasmic binding protein. (348 aa)    
Predicted Functional Partners:
FIC_00949
Transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.976
FIC_00948
ABC transporter related.
 
 
 0.963
mtgA
Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
       0.651
FIC_01615
Probable site-specific recombinase.
       0.626
FIC_00737
Hypothetical protein.
  
     0.605
FIC_01279
Hypothetical protein.
  
     0.557
FIC_01342
Hypothetical protein.
  
     0.503
FIC_01653
Hypothetical protein.
  
     0.481
FIC_01619
Hypothetical protein.
       0.478
FIC_02310
LysM-repeat protein.
 
  
 0.475
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.