STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_01647Lactoylglutathione lyase and related lyase. (190 aa)    
Predicted Functional Partners:
FIC_00055
Methylmalonyl-CoA mutase.
  
 0.986
FIC_00955
Putative methylmalonyl-CoA mutase small subunit.
 
  
 0.977
FIC_00117
LAO/AO transport system ATPase.
     0.888
FIC_00449
Homogentisate 1,2-dioxygenase.
  
 
 0.745
FIC_00433
Methylcrotonyl-CoA carboxylase carboxyl transferase subunit.
  
  
 0.633
rbfA
Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.
       0.619
FIC_02231
B12 binding domain / kinase domain / Methylmalonyl-CoA mutase.
 
   
 0.614
FIC_01649
Lipoprotein releasing system transmembrane protein lolC.
       0.588
FIC_02232
B12 binding domain / kinase domain / Methylmalonyl-CoA mutase.
     
 0.548
FIC_01989
Phenylacetic acid degradation protein PaaN, ring-opening aldehyde dehydrogenase.
  
 
 0.441
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.