STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_01704Hypothetical protein. (323 aa)    
Predicted Functional Partners:
FIC_01703
L-sorbosone dehydrogenase.
 
     0.803
FIC_01705
Putative periplasmic protein.
       0.732
FIC_01702
Protein of unknown function DUF892.
       0.723
FIC_01920
Amine oxidase.
 
    0.562
FIC_02090
Hypothetical protein.
  
    0.556
FIC_00152
Hypothetical protein.
  
 
 0.545
FIC_00660
Hypothetical protein.
  
 
 0.545
FIC_00388
Probable nitrite reductase.
  
 
 0.494
FIC_01278
WD40-like beta Propeller.
   
 
 0.468
FIC_00144
Cytochrome c oxidase subunit CcoP.
  
 
 0.429
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.