STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_01731Alpha-glucuronidase; Belongs to the glycosyl hydrolase 67 family. (681 aa)    
Predicted Functional Partners:
FIC_01733
Endo-1,4-beta-xylanase A precursor.
 
   
 0.944
FIC_01732
Xylosidase/arabinosidase; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.934
FIC_01735
Protein of unknown function DUF303, acetylesterase putative.
 
    0.912
FIC_01737
Hypothetical protein.
     0.870
FIC_01734
Sugar (Glycoside-Pentoside-Hexuronide) transporter.
 
     0.811
FIC_01738
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
   
 0.800
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
     0.514
FIC_01869
Rhamnogalacturonan acetylesterase.
 
    0.511
FIC_01870
Pectate lyase.
  
     0.449
FIC_01741
RagB/SusD domain protein.
  
     0.428
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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