STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_01819ABC transporter permease protein. (422 aa)    
Predicted Functional Partners:
FIC_01817
ABC transporter, ATP-binding protein.
 
 0.997
lolD
Lipoprotein releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
 
 0.986
FIC_01820
Membrane fusion efflux protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.955
FIC_02143
Cell division transporter, ATP-binding protein ftsE.
   
 0.919
FIC_00122
ABC transporter related.
 
      0.899
FIC_02519
Putative outer membrane efflux protein.
 
 
 0.834
FIC_01818
Putative ABC transporter.
 
  
0.829
FIC_01147
Putative multidrug resistance protein.
  
  
 0.772
FIC_01317
Probable Co/Zn/Cd efflux system membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.629
FIC_02403
Multidrug resistance protein, AcrA/AcrE family; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.629
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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