STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_01832Amino acid permease. (459 aa)    
Predicted Functional Partners:
FIC_01833
ABC superfamily ATP binding cassette transporter.
 
   
 0.677
FIC_00546
Alpha-amylase (Neopullulanase) SusA; Belongs to the glycosyl hydrolase 13 family.
   
 0.553
FIC_00730
Periplasmic alpha-amylase.
   
 0.553
FIC_01115
Neopullulanase; Belongs to the glycosyl hydrolase 13 family.
   
 0.553
FIC_01727
Alpha-amylase, putative.
   
 0.553
FIC_01780
1,4-alpha-glucan branching enzyme.
   
 0.553
FIC_02202
Cytoplasmic alpha-amylase.
   
 0.553
rpsP
SSU ribosomal protein S16p; Belongs to the bacterial ribosomal protein bS16 family.
  
    0.494
FIC_01834
Glycoside hydrolase, family 25.
       0.408
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.