STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_01864MscS Mechanosensitive ion channel. (419 aa)    
Predicted Functional Partners:
pdxJ
Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.
       0.786
FIC_01862
Alpha/beta superfamily hydrolase.
  
    0.599
FIC_01865
Hypothetical protein.
       0.581
FIC_01712
Signal transduction histidine kinase.
  
  
 0.553
FIC_00985
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein); Belongs to the GcvP family.
   
    0.551
FIC_01866
Hypothetical protein.
       0.538
FIC_00774
PAS/PAC domain protein.
     
 0.517
FIC_01779
PAS/PAC domain protein.
     
 0.513
FIC_01860
Long-chain-fatty-acid--CoA ligase.
       0.507
FIC_01861
3-beta hydroxysteroid dehydrogenase/isomerase family protein.
       0.507
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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