STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_01931Probable oxidoreductase. (348 aa)    
Predicted Functional Partners:
FIC_01929
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.803
FIC_01930
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
     
 0.797
FIC_00597
Pigmentation and extracellular proteinase regulator; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.760
FIC_01932
Glycosyl transferase, family 4.
  
    0.648
FIC_01933
UDP-glucose 4-epimerase.
  
    0.628
FIC_01928
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.615
FIC_02524
Glycosyl transferase, group 1 family protein.
  
    0.556
FIC_01948
4-keto.6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.553
FIC_01942
4-keto.6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.552
lysS
Lysyl-tRNA synthetase (class II); Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.523
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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