STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_01977Competence protein. (592 aa)    
Predicted Functional Partners:
FIC_00025
Smf protein DNA processing chain A.
 
  
 0.877
FIC_00666
Competence protein.
 
  
 0.870
FIC_00029
MG(2+) chelatase family protein / ComM-related protein.
 
  
 0.802
FIC_01978
lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
       0.723
FIC_01779
PAS/PAC domain protein.
  
    0.661
FIC_00774
PAS/PAC domain protein.
  
  
 0.603
FIC_01708
FOG: PAS/PAC domain protein.
  
    0.575
FIC_00863
Conserved hypothetical protein.
 
  
 0.559
FIC_01801
Competence/damage-inducible protein CinA; Belongs to the CinA family.
     
 0.493
FIC_02060
Single-stranded-DNA-specific exonuclease recJ.
 
   
 0.491
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.