Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FIC_01982 | FIC_01985 | FIC_01982 | FIC_01985 | SNase-like nuclease. | Alpha-1,2-mannosidase. | 0.409 |
FIC_01982 | aspS | FIC_01982 | FIC_01984 | SNase-like nuclease. | Aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.536 |
FIC_01985 | FIC_01982 | FIC_01985 | FIC_01982 | Alpha-1,2-mannosidase. | SNase-like nuclease. | 0.409 |
FIC_01985 | FIC_02123 | FIC_01985 | FIC_02123 | Alpha-1,2-mannosidase. | Major facilitator superfamily MFS_1. | 0.581 |
FIC_01985 | aspS | FIC_01985 | FIC_01984 | Alpha-1,2-mannosidase. | Aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.572 |
FIC_01985 | cutC | FIC_01985 | FIC_02242 | Alpha-1,2-mannosidase. | Probable copper homeostasis protein; Participates in the control of copper homeostasis. Belongs to the CutC family. | 0.417 |
FIC_02123 | FIC_01985 | FIC_02123 | FIC_01985 | Major facilitator superfamily MFS_1. | Alpha-1,2-mannosidase. | 0.581 |
aspS | FIC_01982 | FIC_01984 | FIC_01982 | Aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | SNase-like nuclease. | 0.536 |
aspS | FIC_01985 | FIC_01984 | FIC_01985 | Aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | Alpha-1,2-mannosidase. | 0.572 |
cutC | FIC_01985 | FIC_02242 | FIC_01985 | Probable copper homeostasis protein; Participates in the control of copper homeostasis. Belongs to the CutC family. | Alpha-1,2-mannosidase. | 0.417 |