STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_02031Two component regulator three Y domain protein. (542 aa)    
Predicted Functional Partners:
FIC_02032
Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase; Belongs to the Dps family.
       0.551
FIC_01013
Hypothetical protein.
  
     0.514
FIC_01969
Proprotein convertase, P.
  
     0.512
FIC_01350
Hypothetical protein.
  
     0.504
FIC_01381
Peptidase M4, thermolysin.
 
    0.494
FIC_01952
Hypothetical protein.
  
     0.488
FIC_01949
CHU large protein; uncharacterized.
  
     0.480
FIC_00009
TPR domain protein.
  
     0.470
FIC_01955
Hypothetical protein.
  
     0.467
FIC_01953
Hypothetical protein.
  
     0.428
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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