STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_02091Threonine dehydrogenase-related Zn-dependent dehydrogenase. (383 aa)    
Predicted Functional Partners:
FIC_02090
Hypothetical protein.
     0.959
FIC_01057
Probable oxidoreductase.
 
  
 0.774
kbl
2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.
 
 
 0.738
FIC_01299
2-amino-3-ketobutyrate coenzyme A ligase.
 
 
 0.738
FIC_01920
Amine oxidase.
 
  
 0.665
FIC_01768
Beta-lactamase-like protein.
  
   0.628
FIC_02092
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate.
  
 
 0.617
FIC_01891
5-keto-D-gluconate 5-reductase.
 
 
 0.547
FIC_01164
Short-chain dehydrogenase/reductase, probable oxidoreductase.
 
  
 0.536
FIC_01989
Phenylacetic acid degradation protein PaaN, ring-opening aldehyde dehydrogenase.
  
 
 0.524
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.