STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_02158Nitrogen regulation protein ntrY. (484 aa)    
Predicted Functional Partners:
FIC_01320
Sigma-54 dependent transcriptional regulator/response regulator.
 
 0.965
FIC_00035
Response Regulator Receiver Signal Transduction Histidine Kinase.
 
 
 
 0.878
FIC_01712
Signal transduction histidine kinase.
 
 
 
0.874
FIC_01783
Phosphate regulon transcriptional regulatory protein phoB.
  
 
 
 0.838
FIC_01778
Two-component response regulator.
  
 
 
 0.828
FIC_01008
Response regulator receiver domain protein.
  
 
 
 0.824
FIC_00774
PAS/PAC domain protein.
 
 
 0.811
FIC_01551
Response regulator.
  
 
 
 0.804
FIC_02157
Riboflavin synthase alpha chain.
       0.800
FIC_02159
Methyltransferase; Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC).
       0.791
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.