rpsT protein (Flavobacteriaceae bacterium 351910)

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second shell of interactors

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Predicted Interactions

gene neighborhood

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gene co-occurrence

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Score

rpsT

SSU ribosomal protein S20p; Binds directly to 16S ribosomal RNA. (84 aa)

Predicted Functional Partners:

rplU

0.993

rpmB

0.982

rplM

0.981

rpmF

0.981

rpsU

0.977

rpsO

0.977

rpsP

0.975

rpmE2

0.975

rpmA

0.973

rpmH

0.969

Your Current Organism:

Flavobacteriaceae bacterium 351910

NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplM	rplU	FIC_01960	FIC_02445	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU ribosomal protein L21p; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.996
rplM	rpmA	FIC_01960	FIC_02444	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU ribosomal protein L27p; Belongs to the bacterial ribosomal protein bL27 family.	0.986
rplM	rpmB	FIC_01960	FIC_02172	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU ribosomal protein L28p; Belongs to the bacterial ribosomal protein bL28 family.	0.982
rplM	rpmE2	FIC_01960	FIC_02044	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU ribosomal protein L31p.	0.970
rplM	rpmF	FIC_01960	FIC_02154	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU ribosomal protein L32p; Belongs to the bacterial ribosomal protein bL32 family.	0.979
rplM	rpmH	FIC_01960	FIC_02142	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU ribosomal protein L34p; Belongs to the bacterial ribosomal protein bL34 family.	0.962
rplM	rpsO	FIC_01960	FIC_00469	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	SSU ribosomal protein S15p (S13e); Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.986
rplM	rpsP	FIC_01960	FIC_01831	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	SSU ribosomal protein S16p; Belongs to the bacterial ribosomal protein bS16 family.	0.985
rplM	rpsT	FIC_01960	FIC_02234	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	SSU ribosomal protein S20p; Binds directly to 16S ribosomal RNA.	0.981
rplM	rpsU	FIC_01960	FIC_00265	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	SSU ribosomal protein S21p; Belongs to the bacterial ribosomal protein bS21 family.	0.976
rplU	rplM	FIC_02445	FIC_01960	LSU ribosomal protein L21p; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.996
rplU	rpmA	FIC_02445	FIC_02444	LSU ribosomal protein L21p; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	LSU ribosomal protein L27p; Belongs to the bacterial ribosomal protein bL27 family.	0.999
rplU	rpmB	FIC_02445	FIC_02172	LSU ribosomal protein L21p; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	LSU ribosomal protein L28p; Belongs to the bacterial ribosomal protein bL28 family.	0.993
rplU	rpmE2	FIC_02445	FIC_02044	LSU ribosomal protein L21p; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	LSU ribosomal protein L31p.	0.975
rplU	rpmF	FIC_02445	FIC_02154	LSU ribosomal protein L21p; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	LSU ribosomal protein L32p; Belongs to the bacterial ribosomal protein bL32 family.	0.993
rplU	rpmH	FIC_02445	FIC_02142	LSU ribosomal protein L21p; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	LSU ribosomal protein L34p; Belongs to the bacterial ribosomal protein bL34 family.	0.992
rplU	rpsO	FIC_02445	FIC_00469	LSU ribosomal protein L21p; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	SSU ribosomal protein S15p (S13e); Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.993
rplU	rpsP	FIC_02445	FIC_01831	LSU ribosomal protein L21p; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	SSU ribosomal protein S16p; Belongs to the bacterial ribosomal protein bS16 family.	0.987
rplU	rpsT	FIC_02445	FIC_02234	LSU ribosomal protein L21p; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	SSU ribosomal protein S20p; Binds directly to 16S ribosomal RNA.	0.993
rplU	rpsU	FIC_02445	FIC_00265	LSU ribosomal protein L21p; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	SSU ribosomal protein S21p; Belongs to the bacterial ribosomal protein bS21 family.	0.991