STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_02282Hypothetical protein. (302 aa)    
Predicted Functional Partners:
FIC_01522
phospholipase/Carboxylesterase.
     0.782
FIC_01844
Porphobilinogen synthase; Belongs to the ALAD family.
      0.616
FIC_01523
Hypothetical protein.
 
     0.593
FIC_01524
Hypothetical protein.
 
     0.592
FIC_02281
ABC transporter ATP-binding protein.
       0.557
FIC_00560
Hypothetical protein.
     0.518
FIC_00032
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
    
   0.513
FIC_00201
Hypothetical protein.
    
   0.513
FIC_01521
Periplasmic beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
 
     0.420
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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