STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_02299Hypothetical protein. (229 aa)    
Predicted Functional Partners:
FIC_02298
Conserved hypothetical protein; possible transcriptional regulator, MarR/EmrR family.
 
     0.909
FIC_02297
Hypothetical protein.
 
     0.815
FIC_00261
Transglutaminase-like enzyme.
 
     0.672
FIC_00262
Hypothetical protein.
 
     0.647
FIC_02300
Hypothetical protein.
       0.561
FIC_01109
Helix-turn-helix- domain containing protein, AraC type.
  
     0.516
FIC_02034
Hypothetical protein.
  
     0.515
FIC_02558
Hypothetical protein.
  
     0.506
FIC_02301
Hypothetical protein.
       0.482
FIC_02557
Probable outer membrane receptor protein.
  
     0.470
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.