STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_02387Hypothetical protein. (125 aa)    
Predicted Functional Partners:
FIC_00999
Putative TonB-dependent receptor.
  
   0.739
FIC_02386
ABC transporter, ATP-binding protein, MsbA family.
       0.727
FIC_01418
Putative ferric aerobactin receptor.
  
   0.656
FIC_02577
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate--D-alanyl-D- alanyl ligase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
 
    0.636
FIC_00420
TPR repeat-containing protein.
  
 
   0.631
FIC_00415
Biopolymer transport protein ExbD/TolR.
  
 
 0.555
FIC_00416
Biopolymer transport protein ExbD/TolR.
  
 
 0.555
FIC_00414
MotA/TolQ/ExbB proton channel family protein.
  
 
 0.552
FIC_01342
Hypothetical protein.
 
     0.544
FIC_00040
Biopolymer transport protein ExbD/TolR.
  
 
 0.540
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.