Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FIC_02402Transcriptional regulator. (151 aa)    
Predicted Functional Partners:
FIC_02403
Multidrug resistance protein, AcrA/AcrE family; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.950
FIC_02405
OprM-like outer membrane efflux protein.
 
     0.946
FIC_02404
AcrB/AcrD/AcrF family membrane transport protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
     0.919
FIC_00563
Hypothetical protein.
  
     0.730
FIC_02376
Hypothetical protein.
  
     0.722
FIC_01155
Secreted protein containing hyalin domain.
  
     0.717
FIC_00562
Hypothetical protein.
  
     0.622
FIC_01526
Putative outer membrane protein probably involved in nutrient binding.
  
     0.617
FIC_01045
TPR repeat-containing protein.
  
    0.600
FIC_00189
Hypothetical protein.
  
     0.587
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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