Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKB38193.1 | SKB59894.1 | SAMN05660750_00461 | SAMN05660750_01473 | Outer membrane immunogenic protein. | Invasion protein IalB, involved in pathogenesis. | 0.687 |
SKB38193.1 | SKB66508.1 | SAMN05660750_00461 | SAMN05660750_01725 | Outer membrane immunogenic protein. | Invasion protein IalB, involved in pathogenesis. | 0.720 |
SKB38193.1 | SKB70526.1 | SAMN05660750_00461 | SAMN05660750_01976 | Outer membrane immunogenic protein. | Hypothetical protein. | 0.690 |
SKB38193.1 | SKB85045.1 | SAMN05660750_00461 | SAMN05660750_02652 | Outer membrane immunogenic protein. | Cytochrome c-type protein NapC. | 0.750 |
SKB38193.1 | SKB89683.1 | SAMN05660750_00461 | SAMN05660750_02862 | Outer membrane immunogenic protein. | Phage-related minor tail protein. | 0.688 |
SKB38193.1 | SKB91444.1 | SAMN05660750_00461 | SAMN05660750_03007 | Outer membrane immunogenic protein. | Hypothetical protein. | 0.709 |
SKB38193.1 | SKC08575.1 | SAMN05660750_00461 | SAMN05660750_04134 | Outer membrane immunogenic protein. | Hypothetical protein. | 0.731 |
SKB38193.1 | SKC09796.1 | SAMN05660750_00461 | SAMN05660750_04192 | Outer membrane immunogenic protein. | Porin subfamily protein; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane. | 0.673 |
SKB38193.1 | SKC12360.1 | SAMN05660750_00461 | SAMN05660750_04444 | Outer membrane immunogenic protein. | Tat (twin-arginine translocation) pathway signal sequence. | 0.690 |
SKB38193.1 | SKC15536.1 | SAMN05660750_00461 | SAMN05660750_04869 | Outer membrane immunogenic protein. | Porin subfamily protein. | 0.671 |
SKB59894.1 | SKB38193.1 | SAMN05660750_01473 | SAMN05660750_00461 | Invasion protein IalB, involved in pathogenesis. | Outer membrane immunogenic protein. | 0.687 |
SKB59894.1 | SKB66508.1 | SAMN05660750_01473 | SAMN05660750_01725 | Invasion protein IalB, involved in pathogenesis. | Invasion protein IalB, involved in pathogenesis. | 0.764 |
SKB59894.1 | SKB70526.1 | SAMN05660750_01473 | SAMN05660750_01976 | Invasion protein IalB, involved in pathogenesis. | Hypothetical protein. | 0.756 |
SKB59894.1 | SKB89683.1 | SAMN05660750_01473 | SAMN05660750_02862 | Invasion protein IalB, involved in pathogenesis. | Phage-related minor tail protein. | 0.770 |
SKB59894.1 | SKB91444.1 | SAMN05660750_01473 | SAMN05660750_03007 | Invasion protein IalB, involved in pathogenesis. | Hypothetical protein. | 0.765 |
SKB59894.1 | SKC08575.1 | SAMN05660750_01473 | SAMN05660750_04134 | Invasion protein IalB, involved in pathogenesis. | Hypothetical protein. | 0.772 |
SKB59894.1 | SKC09796.1 | SAMN05660750_01473 | SAMN05660750_04192 | Invasion protein IalB, involved in pathogenesis. | Porin subfamily protein; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane. | 0.734 |
SKB59894.1 | SKC12360.1 | SAMN05660750_01473 | SAMN05660750_04444 | Invasion protein IalB, involved in pathogenesis. | Tat (twin-arginine translocation) pathway signal sequence. | 0.706 |
SKB59894.1 | SKC15536.1 | SAMN05660750_01473 | SAMN05660750_04869 | Invasion protein IalB, involved in pathogenesis. | Porin subfamily protein. | 0.735 |
SKB66508.1 | SKB38193.1 | SAMN05660750_01725 | SAMN05660750_00461 | Invasion protein IalB, involved in pathogenesis. | Outer membrane immunogenic protein. | 0.720 |
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