STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB38193.1Outer membrane immunogenic protein. (216 aa)    
Predicted Functional Partners:
SKB85045.1
Cytochrome c-type protein NapC.
  
 
 0.750
SKC08575.1
Hypothetical protein.
  
     0.731
SKB66508.1
Invasion protein IalB, involved in pathogenesis.
  
     0.720
SKB91444.1
Hypothetical protein.
  
     0.709
SKB70526.1
Hypothetical protein.
  
     0.690
SKC12360.1
Tat (twin-arginine translocation) pathway signal sequence.
  
     0.690
SKB89683.1
Phage-related minor tail protein.
  
     0.688
SKB59894.1
Invasion protein IalB, involved in pathogenesis.
  
     0.687
SKC09796.1
Porin subfamily protein; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
 
 
 0.673
SKC15536.1
Porin subfamily protein.
  
 
 
 0.671
Your Current Organism:
Bosea thiooxidans
NCBI taxonomy Id: 53254
Other names: ATCC 700366, B. thiooxidans, DSM 9653, Gram-negative sodium thiosulfate oxidizer, strain BI 42
Server load: low (12%) [HD]