STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylBXylulokinase. (486 aa)    
Predicted Functional Partners:
SKB48020.1
L-iditol 2-dehydrogenase.
 
 
 0.874
SKC07662.1
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
 
  
 0.785
SKB57738.1
D-ribulokinase.
 
 
0.744
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
  
0.737
SKB47742.1
Mannitol 2-dehydrogenase.
 
  
 0.732
SKB62292.1
6-phosphogluconate dehydrogenase.
  
 
 0.715
SKB38925.1
L-fuculose-phosphate aldolase.
  
 
 0.706
SKB45153.1
L-fuculose-phosphate aldolase.
  
 
 0.706
SKB47923.1
DNA-binding transcriptional regulator LsrR, DeoR family.
 
   
 0.705
SKB57747.1
Ribitol 2-dehydrogenase.
 
  
  0.695
Your Current Organism:
Bosea thiooxidans
NCBI taxonomy Id: 53254
Other names: ATCC 700366, B. thiooxidans, DSM 9653, Gram-negative sodium thiosulfate oxidizer, strain BI 42
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