STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB57357.1Arylsulfatase. (557 aa)    
Predicted Functional Partners:
SKB94756.1
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain.
 
 
   0.936
SKB57201.1
Uncharacterized conserved protein.
 
     0.845
SKB57196.1
Protein of unknown function.
 
     0.835
SKB40401.1
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain.
 
 
   0.833
SKC14415.1
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain.
 
 
   0.806
SKB94853.1
Phosphoserine phosphatase.
 
     0.791
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.769
SKB79701.1
Uncharacterized conserved protein.
 
     0.766
SKB94841.1
Oxygen tolerance.
 
     0.764
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
    
   0.756
Your Current Organism:
Bosea thiooxidans
NCBI taxonomy Id: 53254
Other names: ATCC 700366, B. thiooxidans, DSM 9653, Gram-negative sodium thiosulfate oxidizer, strain BI 42
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.