Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKB39327.1 | SKB58034.1 | SAMN05660750_00535 | SAMN05660750_01380 | Membrane glycosyltransferase. | Glucans biosynthesis protein; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs). | 0.802 |
SKB58034.1 | SKB39327.1 | SAMN05660750_01380 | SAMN05660750_00535 | Glucans biosynthesis protein; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs). | Membrane glycosyltransferase. | 0.802 |
SKB58034.1 | SKB58047.1 | SAMN05660750_01380 | SAMN05660750_01381 | Glucans biosynthesis protein; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs). | Membrane glycosyltransferase. | 0.957 |
SKB58034.1 | glmU | SAMN05660750_01380 | SAMN05660750_01379 | Glucans biosynthesis protein; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs). | Glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. | 0.409 |
SKB58047.1 | SKB58034.1 | SAMN05660750_01381 | SAMN05660750_01380 | Membrane glycosyltransferase. | Glucans biosynthesis protein; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs). | 0.957 |
SKB58047.1 | glmU | SAMN05660750_01381 | SAMN05660750_01379 | Membrane glycosyltransferase. | Glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. | 0.434 |
glmU | SKB58034.1 | SAMN05660750_01379 | SAMN05660750_01380 | Glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. | Glucans biosynthesis protein; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs). | 0.409 |
glmU | SKB58047.1 | SAMN05660750_01379 | SAMN05660750_01381 | Glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. | Membrane glycosyltransferase. | 0.434 |