STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB69180.1Trehalose 6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. (266 aa)    
Predicted Functional Partners:
SKB69166.1
Trehalose 6-phosphate synthase.
 
 
 0.998
SKB69278.1
Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family.
 
  
 0.988
SKB71362.1
RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
   
    0.844
SKB85293.1
Aldo/keto reductase.
   
    0.787
SKB80438.1
UTP--glucose-1-phosphate uridylyltransferase.
    
 0.772
SKB57565.1
Glycosyltransferase involved in cell wall bisynthesis.
  
 0.762
SKB57595.1
Glycosyltransferase involved in cell wall bisynthesis.
  
 0.762
SKB69390.1
Catalase.
   
  
 0.745
SKC14029.1
MobA-like NTP transferase domain-containing protein.
   
 
 0.711
SKB32444.1
Flagellar biosynthesis protein, FliO.
   
    0.698
Your Current Organism:
Bosea thiooxidans
NCBI taxonomy Id: 53254
Other names: ATCC 700366, B. thiooxidans, DSM 9653, Gram-negative sodium thiosulfate oxidizer, strain BI 42
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