Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKB32583.1 | SKB38695.1 | SAMN05660750_00075 | SAMN05660750_00487 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | Hypothetical protein. | 0.746 |
SKB32583.1 | SKB39507.1 | SAMN05660750_00075 | SAMN05660750_00545 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 2-dehydro-3-deoxygluconokinase. | 0.710 |
SKB32583.1 | SKB79868.1 | SAMN05660750_00075 | SAMN05660750_02420 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 2-deoxy-D-gluconate 3-dehydrogenase. | 0.722 |
SKB32583.1 | SKB80303.1 | SAMN05660750_00075 | SAMN05660750_02450 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | Glutamate synthase (NADPH/NADH) large chain. | 0.762 |
SKB32583.1 | SKB93500.1 | SAMN05660750_00075 | SAMN05660750_03090 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | Altronate hydrolase. | 0.722 |
SKB32583.1 | kduI | SAMN05660750_00075 | SAMN05660750_02419 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. | 0.798 |
SKB32583.1 | uxuA | SAMN05660750_00075 | SAMN05660750_02778 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | Mannonate dehydratase; Catalyzes the dehydration of D-mannonate. | 0.770 |
SKB38695.1 | SKB32583.1 | SAMN05660750_00487 | SAMN05660750_00075 | Hypothetical protein. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 0.746 |
SKB38695.1 | SKB79868.1 | SAMN05660750_00487 | SAMN05660750_02420 | Hypothetical protein. | 2-deoxy-D-gluconate 3-dehydrogenase. | 0.746 |
SKB38695.1 | SKB80303.1 | SAMN05660750_00487 | SAMN05660750_02450 | Hypothetical protein. | Glutamate synthase (NADPH/NADH) large chain. | 0.472 |
SKB39507.1 | SKB32583.1 | SAMN05660750_00545 | SAMN05660750_00075 | 2-dehydro-3-deoxygluconokinase. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 0.710 |
SKB39507.1 | SKB79868.1 | SAMN05660750_00545 | SAMN05660750_02420 | 2-dehydro-3-deoxygluconokinase. | 2-deoxy-D-gluconate 3-dehydrogenase. | 0.712 |
SKB39507.1 | SKB80303.1 | SAMN05660750_00545 | SAMN05660750_02450 | 2-dehydro-3-deoxygluconokinase. | Glutamate synthase (NADPH/NADH) large chain. | 0.408 |
SKB39507.1 | SKB93500.1 | SAMN05660750_00545 | SAMN05660750_03090 | 2-dehydro-3-deoxygluconokinase. | Altronate hydrolase. | 0.706 |
SKB39507.1 | uxuA | SAMN05660750_00545 | SAMN05660750_02778 | 2-dehydro-3-deoxygluconokinase. | Mannonate dehydratase; Catalyzes the dehydration of D-mannonate. | 0.804 |
SKB79787.1 | SKB79849.1 | SAMN05660750_02417 | SAMN05660750_02418 | TRAP-type C4-dicarboxylate transport system, small permease component. | TRAP transporter, DctM subunit. | 0.969 |
SKB79787.1 | SKB79868.1 | SAMN05660750_02417 | SAMN05660750_02420 | TRAP-type C4-dicarboxylate transport system, small permease component. | 2-deoxy-D-gluconate 3-dehydrogenase. | 0.827 |
SKB79787.1 | SKB79878.1 | SAMN05660750_02417 | SAMN05660750_02421 | TRAP-type C4-dicarboxylate transport system, small permease component. | Cupin domain protein. | 0.840 |
SKB79787.1 | kduI | SAMN05660750_02417 | SAMN05660750_02419 | TRAP-type C4-dicarboxylate transport system, small permease component. | 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. | 0.855 |
SKB79849.1 | SKB79787.1 | SAMN05660750_02418 | SAMN05660750_02417 | TRAP transporter, DctM subunit. | TRAP-type C4-dicarboxylate transport system, small permease component. | 0.969 |
page 1 of 3