STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB86892.1Diguanylate cyclase (GGDEF) domain-containing protein. (345 aa)    
Predicted Functional Partners:
SKB38845.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.948
SKC13812.1
PAS domain S-box-containing protein.
 0.881
SKB66615.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
0.868
SKB80797.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
 0.857
SKB76256.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
0.841
SKC10205.1
Signal transduction histidine kinase.
 
 
 0.833
SKB89788.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
  
 
  0.809
SKC07964.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
0.805
SKB75974.1
Hypothetical protein.
 
 
 0.797
SKB32508.1
Two-component system, cell cycle sensor histidine kinase and response regulator CckA.
  
 0.787
Your Current Organism:
Bosea thiooxidans
NCBI taxonomy Id: 53254
Other names: ATCC 700366, B. thiooxidans, DSM 9653, Gram-negative sodium thiosulfate oxidizer, strain BI 42
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.