Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKB66347.1 | SKB93596.1 | SAMN05660750_01710 | SAMN05660750_03103 | Condensin subunit Smc. | Condensin subunit ScpA. | 0.990 |
SKB66347.1 | SKB93606.1 | SAMN05660750_01710 | SAMN05660750_03104 | Condensin subunit Smc. | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.865 |
SKB66347.1 | cmk | SAMN05660750_01710 | SAMN05660750_02662 | Condensin subunit Smc. | Cytidylate kinase. | 0.591 |
SKB67377.1 | SKB93596.1 | SAMN05660750_01775 | SAMN05660750_03103 | 23S rRNA pseudouridine2605 synthase. | Condensin subunit ScpA. | 0.517 |
SKB67377.1 | SKB93606.1 | SAMN05660750_01775 | SAMN05660750_03104 | 23S rRNA pseudouridine2605 synthase. | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.749 |
SKB67377.1 | cmk | SAMN05660750_01775 | SAMN05660750_02662 | 23S rRNA pseudouridine2605 synthase. | Cytidylate kinase. | 0.814 |
SKB67377.1 | der | SAMN05660750_01775 | SAMN05660750_01543 | 23S rRNA pseudouridine2605 synthase. | GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.869 |
SKB93587.1 | SKB93596.1 | SAMN05660750_03102 | SAMN05660750_03103 | beta-N-acetylhexosaminidase. | Condensin subunit ScpA. | 0.616 |
SKB93587.1 | SKB93606.1 | SAMN05660750_03102 | SAMN05660750_03104 | beta-N-acetylhexosaminidase. | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.608 |
SKB93587.1 | SKB93616.1 | SAMN05660750_03102 | SAMN05660750_03105 | beta-N-acetylhexosaminidase. | iron(III) transport system ATP-binding protein; Belongs to the ABC transporter superfamily. | 0.605 |
SKB93587.1 | tatA | SAMN05660750_03102 | SAMN05660750_03106 | beta-N-acetylhexosaminidase. | Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.501 |
SKB93596.1 | SKB66347.1 | SAMN05660750_03103 | SAMN05660750_01710 | Condensin subunit ScpA. | Condensin subunit Smc. | 0.990 |
SKB93596.1 | SKB67377.1 | SAMN05660750_03103 | SAMN05660750_01775 | Condensin subunit ScpA. | 23S rRNA pseudouridine2605 synthase. | 0.517 |
SKB93596.1 | SKB93587.1 | SAMN05660750_03103 | SAMN05660750_03102 | Condensin subunit ScpA. | beta-N-acetylhexosaminidase. | 0.616 |
SKB93596.1 | SKB93606.1 | SAMN05660750_03103 | SAMN05660750_03104 | Condensin subunit ScpA. | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.999 |
SKB93596.1 | SKB93616.1 | SAMN05660750_03103 | SAMN05660750_03105 | Condensin subunit ScpA. | iron(III) transport system ATP-binding protein; Belongs to the ABC transporter superfamily. | 0.818 |
SKB93596.1 | SKB99500.1 | SAMN05660750_03103 | SAMN05660750_03493 | Condensin subunit ScpA. | 23S rRNA pseudouridine2605 synthase; Belongs to the pseudouridine synthase RsuA family. | 0.443 |
SKB93596.1 | cmk | SAMN05660750_03103 | SAMN05660750_02662 | Condensin subunit ScpA. | Cytidylate kinase. | 0.776 |
SKB93596.1 | tatA | SAMN05660750_03103 | SAMN05660750_03106 | Condensin subunit ScpA. | Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.640 |
SKB93606.1 | SKB66347.1 | SAMN05660750_03104 | SAMN05660750_01710 | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | Condensin subunit Smc. | 0.865 |
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