STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB94782.1Ca-activated chloride channel family protein. (338 aa)    
Predicted Functional Partners:
SKB94787.1
Ca-activated chloride channel family protein.
     0.991
SKB94769.1
Protein of unknown function DUF58.
 
  
 0.963
SKB94841.1
Oxygen tolerance.
 
   
 0.960
SKB94838.1
Ca-activated chloride channel family protein.
 
   
 0.957
SKB94775.1
Protein of unknown function.
 
     0.956
SKB94763.1
MoxR-like ATPase.
 
 
 0.951
SKB94756.1
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain.
 
     0.806
SKB94853.1
Phosphoserine phosphatase.
 
     0.805
SKB94860.1
Arylsulfatase.
 
     0.760
SKB94747.1
Polyphosphate:nucleotide phosphotransferase, PPK2 family.
       0.752
Your Current Organism:
Bosea thiooxidans
NCBI taxonomy Id: 53254
Other names: ATCC 700366, B. thiooxidans, DSM 9653, Gram-negative sodium thiosulfate oxidizer, strain BI 42
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