STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC13379.1Type VI secretion system protein ImpF. (182 aa)    
Predicted Functional Partners:
SKC13387.1
Type VI secretion system protein ImpH.
 
  
 0.985
SKC13382.1
Type VI secretion system protein ImpG.
 
  
 0.983
SKC13315.1
Type VI secretion system protein ImpK.
 
  
 0.978
SKC13364.1
Type VI secretion system protein ImpB.
 
  
 0.970
SKC13369.1
Type VI secretion system protein ImpC.
 
  
 0.966
SKC13375.1
Type VI secretion system secreted protein Hcp.
 
  
 0.958
SKC13393.1
Type VI secretion system protein VasG; Belongs to the ClpA/ClpB family.
 
  
 0.958
SKC13358.1
Type VI secretion system protein ImpA.
 
  
 0.924
SKC13318.1
Type VI secretion system protein ImpJ.
 
  
 0.918
SKC13311.1
Type VI secretion system protein ImpM.
 
  
 0.895
Your Current Organism:
Bosea thiooxidans
NCBI taxonomy Id: 53254
Other names: ATCC 700366, B. thiooxidans, DSM 9653, Gram-negative sodium thiosulfate oxidizer, strain BI 42
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