STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC14544.1Sn-glycerol 3-phosphate transport system permease protein. (287 aa)    
Predicted Functional Partners:
SKC14543.1
Sn-glycerol 3-phosphate transport system permease protein.
 
  0.991
SKC14542.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
  0.982
SKC14539.1
Sn-glycerol 3-phosphate transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.973
SKB44294.1
lactose/L-arabinose transport system permease protein.
  
  0.959
SKB48184.1
Multiple sugar transport system permease protein.
 
  0.949
SKC06156.1
Sn-glycerol 3-phosphate transport system permease protein.
  
  0.945
ugpC
Sn-glycerol 3-phosphate transport system ATP-binding protein; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
 
  0.938
SKB84725.1
Multiple sugar transport system permease protein.
  
  0.903
SKB57680.1
Multiple sugar transport system permease protein.
  
  0.902
SKB81075.1
Multiple sugar transport system permease protein.
  
  0.898
Your Current Organism:
Bosea thiooxidans
NCBI taxonomy Id: 53254
Other names: ATCC 700366, B. thiooxidans, DSM 9653, Gram-negative sodium thiosulfate oxidizer, strain BI 42
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