Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKB36272.1 | SKB78127.1 | SAMN05660750_00340 | SAMN05660750_02302 | O-antigen ligase. | dTDP-glucose 4,6-dehydratase. | 0.669 |
SKB36272.1 | SKC03076.1 | SAMN05660750_00340 | SAMN05660750_03744 | O-antigen ligase. | Undecaprenyl-phosphate glucose phosphotransferase. | 0.936 |
SKB36272.1 | SKC05334.1 | SAMN05660750_00340 | SAMN05660750_03877 | O-antigen ligase. | O-antigen biosynthesis protein WbqV. | 0.491 |
SKB36272.1 | SKC13108.1 | SAMN05660750_00340 | SAMN05660750_04535 | O-antigen ligase. | Undecaprenyl-phosphate glucose phosphotransferase. | 0.583 |
SKB36272.1 | SKC15411.1 | SAMN05660750_00340 | SAMN05660750_04843 | O-antigen ligase. | Hypothetical protein. | 0.758 |
SKB36272.1 | SKC15423.1 | SAMN05660750_00340 | SAMN05660750_04846 | O-antigen ligase. | Uncharacterized protein involved in exopolysaccharide biosynthesis. | 0.714 |
SKB36272.1 | SKC15430.1 | SAMN05660750_00340 | SAMN05660750_04847 | O-antigen ligase. | Glycosyltransferase, GT2 family. | 0.819 |
SKB36272.1 | SKC15433.1 | SAMN05660750_00340 | SAMN05660750_04848 | O-antigen ligase. | Glycosyltransferase involved in cell wall bisynthesis. | 0.754 |
SKB36272.1 | cpsB | SAMN05660750_00340 | SAMN05660750_00600 | O-antigen ligase. | Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family. | 0.612 |
SKB76769.1 | SKB78127.1 | SAMN05660750_02206 | SAMN05660750_02302 | O-antigen ligase. | dTDP-glucose 4,6-dehydratase. | 0.610 |
SKB76769.1 | SKC03076.1 | SAMN05660750_02206 | SAMN05660750_03744 | O-antigen ligase. | Undecaprenyl-phosphate glucose phosphotransferase. | 0.933 |
SKB76769.1 | SKC05334.1 | SAMN05660750_02206 | SAMN05660750_03877 | O-antigen ligase. | O-antigen biosynthesis protein WbqV. | 0.491 |
SKB76769.1 | SKC13108.1 | SAMN05660750_02206 | SAMN05660750_04535 | O-antigen ligase. | Undecaprenyl-phosphate glucose phosphotransferase. | 0.520 |
SKB76769.1 | SKC15411.1 | SAMN05660750_02206 | SAMN05660750_04843 | O-antigen ligase. | Hypothetical protein. | 0.696 |
SKB76769.1 | SKC15423.1 | SAMN05660750_02206 | SAMN05660750_04846 | O-antigen ligase. | Uncharacterized protein involved in exopolysaccharide biosynthesis. | 0.662 |
SKB76769.1 | SKC15430.1 | SAMN05660750_02206 | SAMN05660750_04847 | O-antigen ligase. | Glycosyltransferase, GT2 family. | 0.814 |
SKB76769.1 | SKC15433.1 | SAMN05660750_02206 | SAMN05660750_04848 | O-antigen ligase. | Glycosyltransferase involved in cell wall bisynthesis. | 0.593 |
SKB76769.1 | cpsB | SAMN05660750_02206 | SAMN05660750_00600 | O-antigen ligase. | Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family. | 0.612 |
SKB78127.1 | SKB36272.1 | SAMN05660750_02302 | SAMN05660750_00340 | dTDP-glucose 4,6-dehydratase. | O-antigen ligase. | 0.669 |
SKB78127.1 | SKB76769.1 | SAMN05660750_02302 | SAMN05660750_02206 | dTDP-glucose 4,6-dehydratase. | O-antigen ligase. | 0.610 |
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