STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKC17959.1Two-component system, OmpR family, sensor kinase. (445 aa)    
Predicted Functional Partners:
SKC13812.1
PAS domain S-box-containing protein.
  
0.989
SKB56873.1
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
 0.987
SKC17954.1
Two-component system, OmpR family, response regulator.
 
 0.987
SKC17951.1
Hypothetical protein.
 
     0.897
SKB76833.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 
 0.839
SKC17943.1
Predicted protein.
 
     0.836
SKC17938.1
Sulfite reductase (NADPH) flavoprotein alpha-component.
 
     0.833
SKB75974.1
Hypothetical protein.
   
 0.821
SKB77242.1
Two-component system, OmpR family, KDP operon response regulator KdpE.
 
 0.814
SKB40746.1
HAMP domain-containing protein.
   
 0.792
Your Current Organism:
Bosea thiooxidans
NCBI taxonomy Id: 53254
Other names: ATCC 700366, B. thiooxidans, DSM 9653, Gram-negative sodium thiosulfate oxidizer, strain BI 42
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.