STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBU75121.1Derived by automated computational analysis using gene prediction method: Protein Homology. (478 aa)    
Predicted Functional Partners:
OBU75120.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.945
OBU75119.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.892
OBU78173.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.860
OBU75516.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.852
OBU77381.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.843
OBU77836.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.839
OBU76014.1
Peptidase C39; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.760
OBU75110.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.732
OBU77734.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.723
OBU74998.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.702
Your Current Organism:
Cylindrospermopsis raciborskii
NCBI taxonomy Id: 533240
Other names: C. raciborskii CS-505, Cylindrospermopsis raciborskii CS-505, Cylindrospermopsis raciborskii CS505
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.