STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBU75946.1Phosphoribulokinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (312 aa)    
Predicted Functional Partners:
A9P98_06955
Hypothetical protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPRTase family.
  
 0.912
OBU76286.1
Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.896
rbcL
Ribulose-bisphosphate carboxylase large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site.
 
  
 0.885
rbcS
Ribulose 1,5-bisphosphate carboxylase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.879
OBU74963.1
Hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.859
OBU75860.1
Phosphoglycerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
  0.859
pyrE-2
Bifunctional orotidine 5'-phosphate decarboxylase/orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
  
 0.859
OBU77298.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.847
OBU77513.1
Type I glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
   
 0.845
OBU77621.1
Type I glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
   
 0.845
Your Current Organism:
Cylindrospermopsis raciborskii
NCBI taxonomy Id: 533240
Other names: C. raciborskii CS-505, Cylindrospermopsis raciborskii CS-505, Cylindrospermopsis raciborskii CS505
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.