STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBU76376.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (129 aa)    
Predicted Functional Partners:
OBU75923.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin.
  
 
 0.963
OBU77423.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin.
  
 
 0.963
OBU75957.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.946
OBU75956.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.932
OBU76907.1
L-glutamate gamma-semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.
  
 0.917
OBU77959.1
Bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.915
gltA
Citrate synthase; Catalyzes the formation of citrate from acetyl-CoA and oxaloacetate; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.890
OBU75912.1
Acetyl CoA synthetase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.886
OBU77961.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.882
menE
2-succinylbenzoate-CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.859
Your Current Organism:
Cylindrospermopsis raciborskii
NCBI taxonomy Id: 533240
Other names: C. raciborskii CS-505, Cylindrospermopsis raciborskii CS-505, Cylindrospermopsis raciborskii CS505
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