STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBU76830.1Alpha-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1045 aa)    
Predicted Functional Partners:
OBU76831.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.615
OBU76511.1
Glucokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.500
OBU76832.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.495
OBU77269.1
N-acetylmannosamine-6-phosphate 2-epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).
 
     0.469
OBU76667.1
Alkaline invertase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.445
OBU75418.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.421
OBU75118.1
Glycerate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.419
OBU78118.1
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.414
OBU75096.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.402
Your Current Organism:
Cylindrospermopsis raciborskii
NCBI taxonomy Id: 533240
Other names: C. raciborskii CS-505, Cylindrospermopsis raciborskii CS-505, Cylindrospermopsis raciborskii CS505
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.