STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBU77578.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (150 aa)    
Predicted Functional Partners:
A9P98_18105
Multidrug ABC transporter ATP-binding protein; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.614
OBU76993.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.570
OBU77000.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.570
OBU78158.1
Murein transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.491
OBU77473.1
Tellurite resistance protein TerB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.464
A9P98_18060
Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.464
OBU77321.1
Molybdenum ABC transporter permease subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.451
OBU77579.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.446
OBU77415.1
DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.430
OBU76194.1
DUF433 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.429
Your Current Organism:
Cylindrospermopsis raciborskii
NCBI taxonomy Id: 533240
Other names: C. raciborskii CS-505, Cylindrospermopsis raciborskii CS-505, Cylindrospermopsis raciborskii CS505
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.