STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRD_00038Serine/Threonine protein kinase. (322 aa)    
Predicted Functional Partners:
CRD_00294
prpS (Protein serine/threonine phosphatases).
  
  0.839
CRD_02900
prpJ-like protein (Protein serine/threonine phosphatases).
  
  0.836
CRD_01553
Protein serine/threonine phosphatase.
  
  0.834
CRD_00257
Multi-component Transcriptional regulator, Winged helix family.
    
 0.801
CRD_01795
Protein serine/threonine phosphatase.
  
  0.799
CRD_00037
Serine/Threonine protein kinase.
      0.789
CRD_02305
TPR repeat protein.
 
   
  0.774
CRD_01139
Hypothetical protein.
  
 
  0.738
CRD_00899
Multi-sensor Hybrid Histidine Kinase.
    
 0.724
CRD_01250
Hypothetical protein.
    
 0.694
Your Current Organism:
Raphidiopsis brookii
NCBI taxonomy Id: 533247
Other names: R. brookii D9, Raphidiopsis brookii D9, Raphidiopsis sp. D9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.