STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRD_00422Protein of unknown function DUF490. (1838 aa)    
Predicted Functional Partners:
CRD_01332
Protein of unknown function DUF1239.
  
   
 0.745
CRD_00840
Conserved hypothetical protein.
  
    0.741
CRD_02832
Conserved hypothetical protein.
 
     0.728
CRD_00361
Conserved hypothetical protein.
  
     0.723
CRD_01177
Conserved hypothetical protein.
  
     0.719
CRD_01464
Protein of unknown function DUF6, transmembrane.
  
     0.715
CRD_02661
Conserved hypothetical protein.
  
     0.715
CRD_00309
Hypothetical protein.
  
     0.696
CRD_01105
Conserved hypothetical protein.
 
   
 0.696
CRD_02220
Conserved hypothetical protein.
 
     0.695
Your Current Organism:
Raphidiopsis brookii
NCBI taxonomy Id: 533247
Other names: R. brookii D9, Raphidiopsis brookii D9, Raphidiopsis sp. D9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.