STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRD_00499Predicted signal transduction protein containing CBS domain proteins. (152 aa)    
Predicted Functional Partners:
CRD_01245
Cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporters.
    
  0.964
CRD_01246
Hypothetical protein.
    
  0.964
guaA
Glutamine amidotransferase, class-I; Catalyzes the synthesis of GMP from XMP.
    
 0.827
CRD_00957
Glutamine amidotransferase, class-II.
    
 0.816
CRD_00899
Multi-sensor Hybrid Histidine Kinase.
    
 0.748
CRD_01080
Hypothetical protein.
    
  0.745
CRD_02195
Ferredoxin (flavodoxin) oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin.
    
  0.743
CRD_01250
Hypothetical protein.
    
 0.723
CRD_02192
Multi-sensor Hybrid Histidine Kinase.
    
 0.682
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
 
   
 0.620
Your Current Organism:
Raphidiopsis brookii
NCBI taxonomy Id: 533247
Other names: R. brookii D9, Raphidiopsis brookii D9, Raphidiopsis sp. D9
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