STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRD_00539Peptidase C14, caspase catalytic subunit p20. (745 aa)    
Predicted Functional Partners:
CRD_00297
Conserved hypothetical protein.
 
 
 0.888
CRD_00558
AAA ATPase, central region protein; Belongs to the AAA ATPase family.
   
 0.884
CRD_02574
AAA ATPase, central region protein.
   
 0.884
CRD_02687
Uncharacterized AAA domain protein-containing protein.
   
 0.884
CRD_02655
Conserved hypothetical protein.
 
 
 0.836
CRD_00684
Phospholipid/glycerol acyltransferase.
    
  0.816
CRD_00830
1-acyl-sn-glycerol-3-phosphate acyltransferase.
    
  0.816
CRD_01852
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
    
  0.816
CRD_01250
Hypothetical protein.
  
 
 0.803
CRD_01640
Conserved hypothetical protein.
 
 
 0.787
Your Current Organism:
Raphidiopsis brookii
NCBI taxonomy Id: 533247
Other names: R. brookii D9, Raphidiopsis brookii D9, Raphidiopsis sp. D9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.